Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905941.1_cds_XP_016456226.1_50084
CDS Infomation

[gene=LOC107780205] [db_xref=GeneID:107780205] [protein=tRNA pseudouridine synthase A, mitochondrial-like] [protein_id=XP_016456226.1] [location=join(49522..50723,50809..51397)] [gbkey=CDS]
Sequence

ATGGAGAACAAAATCGCCCCTTTATCAACTATCGACGAACCACAACCCAAAAAGCAAAAA
ATGTCCACCACCACCTCCGACGATGAAGAAGCCGCAACCGCCGCCGTCGCCGGAGATGGT
CCAGCACCTGAGAGGAAACCGAGATACAAGCGTCGAAAAATCGCATTATTCTTCGCTTAT
TGCGGCGTTGGTTATCAGGGTATGCAGAAGAATCCTGGAGCTAAAACAATCGAAGGGGAT
TTAGAAGAAGCACTTTATCAAGCAGGTGGTGTGCCTGACCATGACAAGTGTCAACCCAGA
AGGTATGATTGGGCTCGTTCTGCTCGTACTGATAAGGGAGTTAGCGCCGTGGGTCAGGTC
GTTTCGGGTCGGTTCTACGTCGACCCGCCTGGTTTTATTGATCGGCTTAACTCGATCCTC
TCTCCTCAAATCCGGATCTTTGGGTTTAAACGGGTAACAAATGCGTTTAATGCTAAGAAG
TTCTGTGACCGGCGTAGGTATGTGTATTTTGTTCCTGTTTTTGCTCTTGACCCATCCTCA
CATCGTGATAGAGAGACTGTATTAGCTAGTGTAGGATCTGGGAAAGAGCTTGTTAAGTGT
TTGGAGTGTTCGGAAAGGGGTCGTAAAGTATTTGGAGTAATGGGTAAACGCGTTTTCGAT
CCGATAACTAAGTCGGTAATTGTTGTTGCTGAACCATGCAATATGCCGAACACTGGAGAT
GCACAACTAACTTTGCAAAATACAGAGAGTAATGTTAATGTTAATGCAAATGATGTGATC
ACTGAGTCAAATATGGTAATTGAAAATGGAGCTTCTGTAAGTGAGAAGGTTGAAGAAACG
AAGGAGGAAGTTGAGAAAGGCGATGAAAATGCTAAAACAGTAGAAGAACAAGTAGAAGAG
TCTGTGTTTTGCTATGGAGAGAAAGAAAAAGAAAGATTTAATAGAATTTTGAAGTACTAC
GAGGGAACTCACAATTTTCACAATTTCACAACAAGAACAAAAGCTGATGATCCTGCTGCC
AAGCGATATATCATTTCGTTTACTGCAAACACTATAGTTAATGTCGAAAGCATTGAATTT
GTGAAGTGTGAGGTTGTAGGTCAGAGCTTTATGCTTCATCAGATCCGTAAAATGATTGGT
CTTGCTGTAGCGATCATGAGAAATTGTGCTCCTGAATCCTTAATTCAAACTGCCTTCCGA
AGGGATGTCAACATTAACGTTCCCATGGCGCCTGAGGTTGGATTGTATTTGGATGAATGC
TTTTTCACCTCATATAACAGTAAGTGGAAGGACACTCATGAAGAAGTGTCTCTGAAAGCT
TATTCAGAGGCAGCGGAAGAATTTAAAATGAAGTATATCTATAGTCATATTGCATCGACG
GAGCACAAGGATGGAACAATGGCTCTATGGCTGCATTCCCTTAATTATCGTAATTACCCT
GATTTGCGTGCTGTGGATAATGGTAATTCTGCTGGTGCTGGTGATGGTTCAAAAGCCGTT
GAAGCTGTTGTTGAGGCTGGTGTAGGTGCTGTCAAGAATGGTGAGAGCACCGAGAATGTT
AATTCTGCTGGTGCTGTTGATGATTCAAAAGCTGTTGAAACTGTTGTTGAGGCTGGTTTA
GGTGCTGTGAGCAATGATGAGAGAACCGATATTGTTAATTCTGCCGGTGCTGGTGATGGT
TCAGAAGTTGAAACTGTTGTTGAGGTTGGTTTAAGTGCTGTCAACAATGGCGAGAGCGCT
GATGCCAAAGATGCTGAGGCAGGGCGTGATGCTGATTTAATCAACTCATAG

Peptide Sequence

PEP ID

XP_016456226.1
PEP Infomation

PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Nicotiana tabacum]
Sequence

MENKIAPLSTIDEPQPKKQKMSTTTSDDEEAATAAVAGDGPAPERKPRYKRRKIALFFAY
CGVGYQGMQKNPGAKTIEGDLEEALYQAGGVPDHDKCQPRRYDWARSARTDKGVSAVGQV
VSGRFYVDPPGFIDRLNSILSPQIRIFGFKRVTNAFNAKKFCDRRRYVYFVPVFALDPSS
HRDRETVLASVGSGKELVKCLECSERGRKVFGVMGKRVFDPITKSVIVVAEPCNMPNTGD
AQLTLQNTESNVNVNANDVITESNMVIENGASVSEKVEETKEEVEKGDENAKTVEEQVEE
SVFCYGEKEKERFNRILKYYEGTHNFHNFTTRTKADDPAAKRYIISFTANTIVNVESIEF
VKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLIQTAFRRDVNINVPMAPEVGLYLDEC
FFTSYNSKWKDTHEEVSLKAYSEAAEEFKMKYIYSHIASTEHKDGTMALWLHSLNYRNYP
DLRAVDNGNSAGAGDGSKAVEAVVEAGVGAVKNGESTENVNSAGAVDDSKAVETVVEAGL
GAVSNDERTDIVNSAGAGDGSEVETVVEVGLSAVNNGESADAKDAEAGRDADLINS

Transcript Sequence

Gene sequence data has not been registered.